Dicom Libraries

10 Components & Libraries

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Dicom Libraries

Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

Convert all DICOM (.dcm) images in a folder to JPG/PNG and extract all patients information in a '.csv' format in a go using python.

Convert all DICOM (.dcm) images in a folder to JPG/PNG and extract all patients information in a '.csv' format in a go using python. For image processing or image classification the most popular supp…

DICOM Image Segmentation with CNNs in Tensorflow

best effort anonymization for medical images using python

Best effort anonymization for medical images in Python. These are basic Python based tools for working with medical images and text, specifically for de-identification. The cleaning method used here …

The DICOM standard, in JSON format, parsed from the HTML version using Python scripts

To provide a standardized and machine-readable way to access DICOM Standard information for software applications To provide a logical model for the relationships between cross-referenced sections in…

Python script to extract a STL surface from a DICOM image series.

dicom2stl and its dependencies can be installed using pip: pip install dicom2stl dicom2stl --help Once you have a DICOM image series zip you can run your first script (Ensure that the ".zip" file is …

Python library for reading and writing image data

Imageio is a Python library that provides an easy interface to read and write a wide range of image data, including animated images, video, volumetric data, and scientific formats. It is cross-platf…

Medical image processing in Python

MedPy is an image processing library and collection of scripts targeted towards medical (i.e. high dimensional) image processing.

Python package to access a cacophony of neuro-imaging file formats

To install the latest development version, run: When working on NiBabel itself, it may be useful to install in "editable" mode:

A set of common support code for medical imaging, surgical navigation, and related purposes.

The Common Toolkit (CTK) is a community-driven effort, focused on providing support code for medical image analysis, surgical navigation, and related projects. To work with CTK, you need to have a C+…

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